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CAPER 3.0

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CAPER 3.0

What's it?

The Chromosome-centric Human Proteome Project (C-HPP) aims to catalog the genome-encoded proteins on the chromosome-by-chromosome basis. As the C-HPP proceeds, the increasing requirement of data-intensive analyses for the MS/MS data poses a challenge to the proteomic community, especially those small laboratories lacking computational infrastructures. To address this challenge, we update the previous CAPER browser into a higher version, CAPER 3.0 – a scalable cloud-based system for the data-intensive analysis of C-HPP datasets. CAPER 3.0 uses cloud computing technology to facilitate MS/MS-based peptide identification. In particular, it can use both public and private cloud, aiming to help analyze the C-HPP datasets.

Link

http://lidong.ncpsb.org/caper3/

How to use it?

Before installing CAPER 3, you need to check that your operating system has Java SE Runtime Environment 8. Download CAPER 3 package here. Example data is provided here. Unzip it and double click the capercloud.jar file, you should see a GUI like below.

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